BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E07SP1|AL427024
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1219 1050 0.0
3x_Contig361 191 2e-48
>3x_Contig1219
Length = 5018
Score = 1050 bits (528), Expect = 0.0
Identities = 533/538 (99%)
Strand = Plus / Minus
Query: 439 gagtacggacgtggagtagattacacaactgtgagtgaatacgaagctttaaagatttca 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5018 gagtacggacgtggagtagattacacaactgtgagtgaatacgaagctttaaagatttca 4959
Query: 499 cagaagtactatgaaatggcagctttgaccaatggacattctgtatccatgtacaagctc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 cagaagtactatgaaatggcagctttgaccaatggacattctgtatccatgtacaagctc 4899
Query: 559 gggatgttctatttgadaggactgagaacgaaatctggtgaaatcgttatcaaaagagac 618
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 gggatgttctatttgaaaggactgagaacgaaatctggtgaaatcgttatcaaaagagac 4839
Query: 619 cctgtacaagctttatactggtttagaatggctaccaaggagatcgawatcccacgagac 678
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4838 cctgtacaagctttatactggtttagaatggctaccaaggagatcgaaatcccacgagac 4779
Query: 679 gataaggctcatgtagaactggaatcagtatcgccacaagcgatggttgagttgggtaag 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 gataaggctcatgtagaactggaatcagtatcgccacaagcgatggttgagttgggtaag 4719
Query: 739 atttacggatttgaagagttagacgaatccgttagacaagagcttctgagaaacggaatc 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 atttacggatttgaagagttagacgaatccgttagacaagagcttctgagaaacggaatc 4659
Query: 799 actcaagataaggaaaaatcgatcaaatactattatwgatgcgcccatgacttcgattat 858
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4658 actcaagataaggaaaaatcgatcaaatactattatagatgcgcccatgacttcgattat 4599
Query: 859 tctcaagcccaatacaaattgggtcatttttatgaatttggggrgatgggactacctgta 918
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4598 tctcaagcccaatacaaattgggtcatttttatgaatttggggagatgggactacctgta 4539
Query: 919 atacccaagaagtccattgcatggtacgcaaagagttccatgaacaagaccaaacmaa 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4538 atacccaagaagtccattgcatggtacgcaaagagttccatgaacaagaccaaaccaa 4481
>3x_Contig361
Length = 1383
Score = 191 bits (96), Expect = 2e-48
Identities = 103/104 (99%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 1 gatctttcaaattactcttccgaggctgtcgcgttttatgaagcatatgacagaaccgtc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1268 gatctttcaaattactcttccgagg-tgtcgcgttttatgaagcatatgacagaaccgtc 1326
Query: 61 aaggacgcaaacaagtttacgaaggatatccagttgaaatggtg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 aaggacgcaaacaagtttacgaaggatatccagttgaaatggtg 1370
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5764
Number of Sequences: 1807
Number of extensions: 5764
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 2
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)